FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007942371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475133
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC6100.1283851048022343No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5940.1250176266434872No Hit
GTTCTGGGACGCAGCCATGTAGTCCTGCGGTGCCGCACGACGCT5800.12207108325458346No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT4950.10418135553623932No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA4860.10228714907194406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)