FastQCFastQC Report
Sun 21 May 2023
EGAF00007942372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475133
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43490.9153226570244541No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8070.16984717963180834No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5880.12375482233395702No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5830.12270248540934853No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5160.10860117061959494No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4940.10397088815131764No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)