FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473363
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45330.9576160367413591No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19030.4020170566774336No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10850.22921098607199972No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8220.17365108806560717No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6670.14090666148389291No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4760.10055707776061923No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)