FastQCFastQC Report
Wed 31 May 2023
EGAF00007942456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451375
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39020.8644696759900304No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11570.25632788701190806No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10100.22376073109941844No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5120.11343118249792301No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5010.1109941844364442No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4710.10434782608695652No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)