FastQCFastQC Report
Sun 21 May 2023
EGAF00007942464

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942464
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436613
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG31100.7123012828294165No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21300.4878462162143592No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC12050.2759881176236163No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT7050.16147022649348508No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6480.1484151869046501No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT4780.10947910392040548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)