FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007942494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461098
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20310.4404703555426395No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11170.2422478518666314No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGGCC7850.1702458045795037No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7590.1646070900329214No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGGCT6590.1429197263922203No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5920.12838919275295055No Hit
CCGAAGAAAAACCGTAAACCGAAGCCACCGAAA4850.10518371365740037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)