FastQCFastQC Report
Sun 21 May 2023
EGAF00007942504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465055
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7940.1707324940060853No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT6890.1481545193579254No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5880.12643665802969542No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5320.11439507155067681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)