FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007942508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478011
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7440.15564495377721432No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7130.1491597473698304No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTCAG7120.1489505471631406No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6150.12865812711422958No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGGCC4890.10229890107131426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)