FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439949
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22410.5093772232690608No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT9440.21457032519678418No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5300.12046850884988942No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT4900.11137654591782228No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC4770.10842165796490048No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)