FastQCFastQC Report
Wed 31 May 2023
EGAF00007942528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467334
Sequences flagged as poor quality0
Sequence length33
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC8890.19022797399718402No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7040.15064172519012098No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5680.1215404828238476No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5300.11340925333915358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)