FastQCFastQC Report
Wed 31 May 2023
EGAF00007942532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466023
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21950.47100679580192395No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG17770.3813116520000086No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8140.17466949056162465No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG6980.14977801524817444No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6340.1360447874890295No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG6080.13046566371187687No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5400.11587410921778539No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT4840.10385753492853356No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATCCG4750.1019262997749038No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)