FastQCFastQC Report
Sun 21 May 2023
EGAF00007942576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490737
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65811.3410441845632182No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17160.34967813716919655No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13850.28222856642152516No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11920.2428999647469011No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11810.24065843822658572No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9750.1986807597552253No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7120.1450878984058671No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6560.13367649066607978No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5890.12002355640597713No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5840.11900468071492469No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5600.11411407739787299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)