FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences423743
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20950.49440344737258196No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT15210.35894398255546406No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG13150.3103296101646517No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG11910.2810665898905705No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11730.276818732108849No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG7090.16731839818002892No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5940.14017930679680846No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4910.11587212060140226No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT4600.10855636553288195No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)