FastQCFastQC Report
Sun 21 May 2023
EGAF00007942602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences423511
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17840.42124053448434634No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10770.25430272177109925No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8680.20495335422220437No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4990.1178245665401843No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4510.10649074050024675No Hit

[OK]Adapter Content

Adapter graph