FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456092
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47881.0497882006261894No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10270.2251738684300536No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG8260.18110381238872858No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7790.17079887391140383No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG6400.14032256649974129No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC5030.1102847671083904No Hit
GCACCGACCTCCGCGGCGAGCCGTAAACCAG4790.10502267086465011No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA4660.10217236873262413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)