FastQCFastQC Report
Wed 31 May 2023
EGAF00007942624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445666
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44540.9994031404684226No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA12250.2748695211211984No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9240.20733015307427535No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6680.14988803274200857No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC6330.1420346178528315No Hit

[OK]Adapter Content

Adapter graph