FastQCFastQC Report
Wed 31 May 2023
EGAF00007942626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449925
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49041.0899594376840585No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13260.2947157859643274No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7020.15602600433405567No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6430.14291270767350114No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5950.132244262932711No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5360.11913096627215647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)