FastQCFastQC Report
Wed 31 May 2023
EGAF00007942638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465718
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT44360.95250774073581No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT23680.5084622024486921No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21730.4665913707436689No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA12830.27548860039766554No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC11400.24478332381398185No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8440.18122554850789535No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG7510.16125638261780734No Hit
GATGTCCAGTCTGGTGCGATCGTTGAACCGG6050.12990693939250791No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6040.129692217178636No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT4900.10521388479723781No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4660.10006055166431188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)