FastQCFastQC Report
Wed 31 May 2023
EGAF00007942686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417821
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21190.5071549778493661No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13310.31855746838957355No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7640.18285342287726083No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6750.16155243513370557No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6010.14384150150423267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)