FastQCFastQC Report
Sun 21 May 2023
EGAF00007942688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences425973
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29640.6958187490756457No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22200.5211597918177913No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13830.3246684649027051No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7390.17348517394294943No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6310.14813145434100283No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6150.14437534773330704No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5890.13827167449580138No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4980.11690881816453155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)