FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422217
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47541.1259612947844355No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11720.2775823806241814No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6610.15655456791176103No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5350.1267120935443149No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4440.10515919539004824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)