FastQCFastQC Report
Sun 21 May 2023
EGAF00007942714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences425112
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26630.6264231543687311No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22430.527625661002277No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11840.27851483844257513No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7680.18065827358437306No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG6310.14843147217674402No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6260.1472553115414291No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6070.14278590112723233No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4560.1072658499407215No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4370.10279643952652477No Hit
GTGCAGGACGCCACCGTTGGCGCAGAAAAAG4270.10044411825589492No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)