FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007942718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences479858
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49111.0234277640468639No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT38080.7935680972287634No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16720.3484364124386798No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12820.26716236886745665No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11880.24757324041695666No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11440.23840386114225456No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10740.2238162122961376No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8920.18588832529623348No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8110.16900833163144097No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7740.16129771724135056No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7570.1577550025215793No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7290.15191994298313252No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7140.14879401823039315No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6570.13691550416998363No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6390.1331643944666964No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC5880.1225362503073826No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5870.12232785532386664No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5650.11774316568651559No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5630.11732637571948369No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC4990.10398909677446244No Hit

[OK]Adapter Content

Adapter graph