FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455908
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40070.8789053931933636No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13310.2919448660694701No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10130.22219395141124965No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG7750.16999043666704686No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5650.1239285118927503No Hit
ACCCAGGGCGAAGTAAACGTGACGGGTGTTA5590.12261245689919897No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5130.11252270194863877No Hit
ACCACTCCGACGAAAAGCCACTTCGCAAACC5000.10967124946261089No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4820.10572308448195689No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4680.10265228949700378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)