FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007942810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450468
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG37150.8246978697709937No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15100.33520694033760445No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5960.13230684532530612No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4660.10344796966710178No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA4540.10078407345249828No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)