FastQCFastQC Report
Sun 21 May 2023
EGAF00007942822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511571
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32370.6327567434432366No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA24740.48360833589081476No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10770.21052796190558104No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10180.19899486092839505No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9660.18883009396545153No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7180.1403519746037207No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5440.10633910053540956No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5150.10067028819069103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)