FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942834

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942834
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432707
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27240.6295252907856818No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA21100.4876278867686448No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC16140.3730006678884326No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG10850.2507470413004643No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10210.23595643241269496No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG9680.22370795942751098No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9610.22209023658041122No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA9100.21030397012297003No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG8680.20059763304037143No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8620.19921101345714304No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8440.19505115470745793No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG7260.16778096957063326No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6670.1541458770022209No Hit
TCTGCCTGCAACGATTTCAGCGTTCGTATGC6510.15044822478027858No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6330.14628836603059345No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6190.1430529203363939No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT4880.11277839276924108No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA4840.11185397971375549No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4800.11092956665826992No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATG4650.10746301770019898No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4600.10630750138084201No Hit

[OK]Adapter Content

Adapter graph