FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007942854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527041
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34680.6580133234416298No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17250.32729901468766187No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5730.1087201944440755No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5660.10739202452940094No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)