FastQCFastQC Report
Sun 21 May 2023
EGAF00007942868

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942868
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468007
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67441.441004087545699No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG21370.4566171018809548No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG15050.32157638667797706No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG14070.30063652894080645No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11540.24657750845607007No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC10720.2290564030025192No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6500.13888681152204987No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG6450.13781845143341875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)