FastQCFastQC Report
Sun 21 May 2023
EGAF00007942872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501952
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG69851.3915673211781205No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA33150.6604217136299886No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA16020.31915402269539717No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA14180.28249713119979597No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12970.2583912405967104No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG11680.2326915721025118No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10400.20719112584470228No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9470.18866345786051256No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG9060.18049534616855795No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8690.17312412342215988No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG8530.1699365676399337No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG7100.14144778783628714No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG6690.13327967614433253No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG6570.1308890093076629No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC6560.13068978707127374No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6420.12790067576182584No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC6160.12272089761570827No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6160.12272089761570827No Hit
ATGTCCAACATGGACATCGATGGTATTAACA5610.11176367461430575No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG5510.10977145225041438No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5170.10299789621318373No Hit

[OK]Adapter Content

Adapter graph