FastQCFastQC Report
Sun 21 May 2023
EGAF00007942879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511603
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8140.15910774565434527No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA6950.1358475223952948No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5920.11571472411225109No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)