FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007942908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499233
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49160.9847105459775296No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17710.35474417756838994No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14790.2962544543329467No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7240.1450224644604824No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6330.12679450276724497No Hit
CCGAAACGTCTGAACCTGTACATCGATGGTG5390.10796561925994475No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG5160.10335855201879683No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)