FastQCFastQC Report
Sun 21 May 2023
EGAF00007942910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503257
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13300.26427848991668274No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12080.2400364028716938No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8430.16750884736824326No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7750.1539968644251347No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5480.10889068607093394No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5350.106307512861222No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)