FastQCFastQC Report
Sun 21 May 2023
EGAF00007942938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences410989
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10350.25183155753560316No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6530.15888503098623077No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5800.14112299842574863No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5480.13333690196087972No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4480.10900535050816446No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4260.1036524091885671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)