FastQCFastQC Report
Sun 21 May 2023
EGAF00007942954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411822
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12270.2979442574704605No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10110.24549441263458485No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9800.23796688860721382No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7340.1782323430996887No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6080.14763660027876122No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5460.1325815522240191No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4910.11922626765932855No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4260.10344274953742151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)