FastQCFastQC Report
Wed 31 May 2023
EGAF00007943086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences388249
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50651.3045751566649237No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT50501.300711656694544No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC33030.8507426934776394No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19490.5019974294846864No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10500.2704449979265883No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG9040.23284026488155796No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8650.2227951649585704No Hit
TCCACCGGTGGTAACGGCCTGGTTGGTTTCG8370.2155832983471947No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG8030.2068260317476671No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7790.20064443179505934No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG7700.19832633181283144No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7200.18544799857823202No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6420.16535779873225687No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT6000.15453999881519334No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC5270.13573763229267816No Hit
GGCGAAGGTGTAGTTGGCTTCGCGGATGTTC5080.13084386566353037No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4890.1259500990343826No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4880.12569253236969058No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4880.12569253236969058No Hit
GGCCTGACTTCTTATGATGAACCGCTGGTTA4540.11693526577016297No Hit
GCACCGACCTCCGCGGCGAGCCGTAAACCAG4110.10585989918840745No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA3950.10173883255333563No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT3940.10148126588864362No Hit

[OK]Adapter Content

Adapter graph