FastQCFastQC Report
Sun 21 May 2023
EGAF00007943130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521602
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44120.8458556523939709No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC19480.3734648256716807No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG17020.3263024298219715No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16960.32515212748417377No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG16350.3134573870498963No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC9900.18979988573663445No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7910.1516481915330079No Hit
TACCAGGTTGGCATCGACGGCTCTAACCTGG6530.1251912377636589No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5700.10927872209078952No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG5250.10065145455730613No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)