FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007943184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522912
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44430.8496649531852396No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12770.24420935071293065No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8900.17020072211002998No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC8200.1568141484609265No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7360.1407502600820023No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6180.11818432164494216No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6140.1174193745792791No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG6100.11665442751361607No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6040.11550700691512147No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5990.11455082308304265No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5440.10403280093017563No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5400.10326785386451257No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)