FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460151
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45550.989892448348477No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11670.2536124011465801No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11450.24883136187903535No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5790.12582826072311046No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5380.11691814208814064No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4930.10713874358634448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)