FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences531762
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13760.2587623786581215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11150.20968027049695165No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10100.1899345947999293No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGG9190.17282167586250993No Hit
CCGGATTTTGAACAGAACATTGCGACCACCA7190.13521086501103877No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG6850.12881702716628868No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6550.123175405538568No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6150.11565324336827378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)