FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507514
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16280.3207793282549841No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13940.2746722257908156No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13650.26895809770764945No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7130.1404887352861202No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5760.11349440606564548No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5310.10462765559176691No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)