FastQCFastQC Report
Wed 31 May 2023
EGAF00007943314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457563
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40950.8949587269949713No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA23370.5107493394352254No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG12390.27078238406514515No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12240.26750414696992547No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG12020.26269606589693656No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC11210.24499358558275033No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG10520.22991369494473984No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10440.22816530182728934No Hit
GATGTCCAGTCTGGTGCGATCGTTGAACCGG9770.21352250946864146No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9740.21286686204959757No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9150.19997246280840014No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8760.191449046360829No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8160.1783360979799503No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC7870.17199817292919226No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7590.16587879701811553No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7420.16216346164353324No Hit
GCACCGACCTCCGCGGCGAGCCGTAAACCAG7140.1560440857324565No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7130.1558255365927752No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6630.14489807960870962No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5900.12894399241197388No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5410.1182350845675896No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5290.11561249489141386No Hit
CCGACCAGCGGTCCGCTGAACATCCCGCAAC5260.11495684747236992No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4970.10861892242161189No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4670.10206244823117254No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)