FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007943338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474631
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13640.28738114451015634No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13170.27747871504389726No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9010.18983167976807247No Hit
CGTGTTCGTGGCCACTATCGTGCGCCATGGG5520.1163008737313829No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4860.10239533448089147No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)