FastQCFastQC Report
Wed 31 May 2023
EGAF00007943340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454988
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG32880.7226564217078253No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11810.2595672852910407No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT7260.15956464785884464No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6710.1474764169604473No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5450.11978337890230073No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT5230.11494808654294178No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)