FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497563
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG84501.698277404067425No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8250.16580814891782547No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6150.12360243828419717No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5110.10270056254182887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)