FastQCFastQC Report
Sun 21 May 2023
EGAF00007943424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463239
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65881.4221600512910182No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25730.5554368263466591No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10380.22407439788100741No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8240.17787794205582863No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7740.1670843776106934No Hit
GAACGTACCACTGACGGTAAACTGGATCCGC7040.15197338738750407No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6470.1396687239200499No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5360.1157070108518497No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG5020.10836738702915774No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4810.10383408996220092No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4750.10253886222878471No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)