FastQCFastQC Report
Wed 31 May 2023
EGAF00007943448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461528
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49611.0749076979078194No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10850.2350886620096722No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5870.127186216220901No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5330.11548595101488968No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)