FastQCFastQC Report
Sun 21 May 2023
EGAF00007943470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences400661
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42161.0522611384686804No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13790.34418124050007365No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6440.16073438642643031No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5670.14151614457109626No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4830.12055078981982273No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4500.112314400453251No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG4500.112314400453251No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4320.10782182443512095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)