FastQCFastQC Report
Wed 31 May 2023
EGAF00007943488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508233
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41610.8187189733842548No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16460.32386720264130825No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14070.2768415274096723No Hit
TCTGGCTACGAAATTGACCACATCGACCTGG10630.2091560366997027No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9120.17944525444038462No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7770.1528826345396698No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5590.10998892240370066No Hit
GGTCAGAAAGGTGGCGCGCAGAAGTCCCAGA5520.10861160137181174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)