FastQCFastQC Report
Wed 31 May 2023
EGAF00007943496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences545145
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT67681.241504553834301No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA21400.3925561089251484No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19200.3521998734281705No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15250.2797420869676875No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC14640.26855240348898No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC12130.22250960753560978No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT10790.19792899136926875No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC10180.18673930789056123No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10180.18673930789056123No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9120.16729493987838098No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8940.1639930660649919No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC7700.14124682423942253No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7370.13519338891487587No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6880.12620495464509443No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6630.12161901879316511No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG6570.1205183941887021No Hit
GGTGACGTTGCTAAAGCGATCAATGACGCGG6470.11868401984793037No Hit
ATGGGTGCAGACATGGTAGAACTGGACATTC5690.10437589998991094No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5580.10235808821506204No Hit
CGCGGCCGTGGTAAAGGTAAGTCTCGTGATA5530.1014409010446762No Hit

[OK]Adapter Content

Adapter graph